Cluster: HRGMv2_0035_CGC2
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0035
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0035_1 | HRGMv2_0035_1_250 | 276175 | 277284 | - | GT28 |
| pfam | HRGMv2_0035_1 | HRGMv2_0035_1_251 | 277281 | 278654 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0035_1 | HRGMv2_0035_1_252 | 278894 | 279856 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0035_1_250
Type: CAZyme
Location: 276175 - 277284 (-)
Type: CAZyme
Location: 276175 - 277284 (-)
Gene ID: HRGMv2_0035_1_251
Type: pfam
Location: 277281 - 278654 (-)
Type: pfam
Location: 277281 - 278654 (-)
Gene ID: HRGMv2_0035_1_252
Type: TC
Location: 278894 - 279856 (-)
Type: TC
Location: 278894 - 279856 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.