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Cluster: HRGMv2_0035_CGC11

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0035_13 HRGMv2_0035_13_36 34630 35373 + GT26
pfam HRGMv2_0035_13 HRGMv2_0035_13_37 35464 36111 + PS_Dcarbxylase
pfam HRGMv2_0035_13 HRGMv2_0035_13_38 36108 36797 + CDP-OH_P_transf
CAZyme HRGMv2_0035_13 HRGMv2_0035_13_39 36819 38105 + GT2
NULL(UNKNOWN) HRGMv2_0035_13 HRGMv2_0035_13_40 38112 38582 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0035_13 HRGMv2_0035_13_41 39439 42198 + 3.A.3.4.1
NULL(UNKNOWN) HRGMv2_0035_13 HRGMv2_0035_13_42 42312 42434 + NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0035_13 HRGMv2_0035_13_43 42640 43194 + ATC_hydrolase
TC HRGMv2_0035_13 HRGMv2_0035_13_44 43196 44632 + 2.A.35.1.1
Gene ID: HRGMv2_0035_13_36
Type: CAZyme
Location: 34630 - 35373 (+)
Gene ID: HRGMv2_0035_13_37
Type: pfam
Location: 35464 - 36111 (+)
Gene ID: HRGMv2_0035_13_38
Type: pfam
Location: 36108 - 36797 (+)
Gene ID: HRGMv2_0035_13_39
Type: CAZyme
Location: 36819 - 38105 (+)
Gene ID: HRGMv2_0035_13_40
Type:
Location: 38112 - 38582 (-)
Gene ID: HRGMv2_0035_13_41
Type: TC
Location: 39439 - 42198 (+)
Gene ID: HRGMv2_0035_13_42
Type:
Location: 42312 - 42434 (+)
Gene ID: HRGMv2_0035_13_43
Type: pfam
Location: 42640 - 43194 (+)
Gene ID: HRGMv2_0035_13_44
Type: TC
Location: 43196 - 44632 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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