Cluster: HRGMv2_0035_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0035
- CGC Family ID: CGCFAM_04633
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0035_1 | HRGMv2_0035_1_116 | 128047 | 128817 | - | GT111 |
| pfam | HRGMv2_0035_1 | HRGMv2_0035_1_117 | 128917 | 129285 | - | 23S_rRNA_IVP |
| STP | HRGMv2_0035_1 | HRGMv2_0035_1_118 | 129403 | 130521 | - | Pyr_redox |
| TC | HRGMv2_0035_1 | HRGMv2_0035_1_119 | 130753 | 132204 | - | 9.B.18.1.2 |
Gene ID: HRGMv2_0035_1_116
Type: CAZyme
Location: 128047 - 128817 (-)
Type: CAZyme
Location: 128047 - 128817 (-)
Gene ID: HRGMv2_0035_1_117
Type: pfam
Location: 128917 - 129285 (-)
Type: pfam
Location: 128917 - 129285 (-)
Gene ID: HRGMv2_0035_1_118
Type: STP
Location: 129403 - 130521 (-)
Type: STP
Location: 129403 - 130521 (-)
Gene ID: HRGMv2_0035_1_119
Type: TC
Location: 130753 - 132204 (-)
Type: TC
Location: 130753 - 132204 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus massiliensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.