Cluster: HRGMv2_0034_CGC3
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0034
- CGC Family ID: CGCFAM_01930
- Continent: Asia
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0034_3 | HRGMv2_0034_3_45 | 51641 | 54175 | - | GT30 |
| TC | HRGMv2_0034_3 | HRGMv2_0034_3_46 | 54194 | 55978 | - | 3.A.1.106.3 |
| CAZyme | HRGMv2_0034_3 | HRGMv2_0034_3_47 | 55975 | 57111 | - | GT19 |
| STP | HRGMv2_0034_3 | HRGMv2_0034_3_48 | 57672 | 59258 | + | Aminotran_1_2 |
| TC | HRGMv2_0034_3 | HRGMv2_0034_3_49 | 59286 | 61016 | + | 2.A.81.1.1 |
Gene ID: HRGMv2_0034_3_45
Type: CAZyme
Location: 51641 - 54175 (-)
Type: CAZyme
Location: 51641 - 54175 (-)
Gene ID: HRGMv2_0034_3_46
Type: TC
Location: 54194 - 55978 (-)
Type: TC
Location: 54194 - 55978 (-)
Gene ID: HRGMv2_0034_3_47
Type: CAZyme
Location: 55975 - 57111 (-)
Type: CAZyme
Location: 55975 - 57111 (-)
Gene ID: HRGMv2_0034_3_48
Type: STP
Location: 57672 - 59258 (+)
Type: STP
Location: 57672 - 59258 (+)
Gene ID: HRGMv2_0034_3_49
Type: TC
Location: 59286 - 61016 (+)
Type: TC
Location: 59286 - 61016 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus hominis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.