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Cluster: HRGMv2_0034_CGC2

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0034_2 HRGMv2_0034_2_242 253515 255119 + 2.A.58.2.2
pfam HRGMv2_0034_2 HRGMv2_0034_2_243 255648 256202 + Lysine_decarbox | LDcluster4
CAZyme HRGMv2_0034_2 HRGMv2_0034_2_244 256482 257411 + GT8
pfam HRGMv2_0034_2 HRGMv2_0034_2_245 257443 258639 + Wzy_C
CAZyme HRGMv2_0034_2 HRGMv2_0034_2_246 258684 259475 + GT25
CAZyme HRGMv2_0034_2 HRGMv2_0034_2_247 259670 260464 + GT25
CAZyme HRGMv2_0034_2 HRGMv2_0034_2_248 260461 261522 + GT9
CAZyme HRGMv2_0034_2 HRGMv2_0034_2_249 261519 262514 + GT8
Gene ID: HRGMv2_0034_2_242
Type: TC
Location: 253515 - 255119 (+)
Gene ID: HRGMv2_0034_2_243
Type: pfam
Location: 255648 - 256202 (+)
Gene ID: HRGMv2_0034_2_244
Type: CAZyme
Location: 256482 - 257411 (+)
Gene ID: HRGMv2_0034_2_245
Type: pfam
Location: 257443 - 258639 (+)
Gene ID: HRGMv2_0034_2_246
Type: CAZyme
Location: 258684 - 259475 (+)
Gene ID: HRGMv2_0034_2_247
Type: CAZyme
Location: 259670 - 260464 (+)
Gene ID: HRGMv2_0034_2_248
Type: CAZyme
Location: 260461 - 261522 (+)
Gene ID: HRGMv2_0034_2_249
Type: CAZyme
Location: 261519 - 262514 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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