Cluster: HRGMv2_0033_CGC8
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0033
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0033_11 | HRGMv2_0033_11_27 | 24021 | 25244 | + | GH171 |
| TC | HRGMv2_0033_11 | HRGMv2_0033_11_28 | 25489 | 26718 | - | 2.A.1.2.20 |
| NULL(UNKNOWN) | HRGMv2_0033_11 | HRGMv2_0033_11_29 | 27088 | 28173 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| pfam | HRGMv2_0033_11 | HRGMv2_0033_11_30 | 28333 | 28710 | + | MatE |
| TC | HRGMv2_0033_11 | HRGMv2_0033_11_31 | 29069 | 29521 | + | 3.A.7.19.1 |
Gene ID: HRGMv2_0033_11_27
Type: CAZyme
Location: 24021 - 25244 (+)
Type: CAZyme
Location: 24021 - 25244 (+)
Gene ID: HRGMv2_0033_11_28
Type: TC
Location: 25489 - 26718 (-)
Type: TC
Location: 25489 - 26718 (-)
Gene ID: HRGMv2_0033_11_29
Type:
Location: 27088 - 28173 (+)
Type:
Location: 27088 - 28173 (+)
Gene ID: HRGMv2_0033_11_30
Type: pfam
Location: 28333 - 28710 (+)
Type: pfam
Location: 28333 - 28710 (+)
Gene ID: HRGMv2_0033_11_31
Type: TC
Location: 29069 - 29521 (+)
Type: TC
Location: 29069 - 29521 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.