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Cluster: HRGMv2_0033_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0033_8 HRGMv2_0033_8_13 17602 19194 + GT83
TC HRGMv2_0033_8 HRGMv2_0033_8_14 19551 20894 + 2.A.25.1.4
TC HRGMv2_0033_8 HRGMv2_0033_8_15 21901 23061 + 3.A.1.4.8
TC HRGMv2_0033_8 HRGMv2_0033_8_16 23140 24060 + 3.A.1.4.10
TC HRGMv2_0033_8 HRGMv2_0033_8_17 24063 25130 + 3.A.1.4.10
TC HRGMv2_0033_8 HRGMv2_0033_8_18 25127 25909 + 3.A.1.4.10
TC HRGMv2_0033_8 HRGMv2_0033_8_19 25909 26619 + 3.A.1.4.10
TC HRGMv2_0033_8 HRGMv2_0033_8_20 26719 27543 + 3.A.1.26.7
TC HRGMv2_0033_8 HRGMv2_0033_8_21 27534 28391 + 3.A.1.26.9
TC HRGMv2_0033_8 HRGMv2_0033_8_22 28391 29203 + 3.A.1.25.6
Gene ID: HRGMv2_0033_8_13
Type: CAZyme
Location: 17602 - 19194 (+)
Gene ID: HRGMv2_0033_8_14
Type: TC
Location: 19551 - 20894 (+)
Gene ID: HRGMv2_0033_8_15
Type: TC
Location: 21901 - 23061 (+)
Gene ID: HRGMv2_0033_8_16
Type: TC
Location: 23140 - 24060 (+)
Gene ID: HRGMv2_0033_8_17
Type: TC
Location: 24063 - 25130 (+)
Gene ID: HRGMv2_0033_8_18
Type: TC
Location: 25127 - 25909 (+)
Gene ID: HRGMv2_0033_8_19
Type: TC
Location: 25909 - 26619 (+)
Gene ID: HRGMv2_0033_8_20
Type: TC
Location: 26719 - 27543 (+)
Gene ID: HRGMv2_0033_8_21
Type: TC
Location: 27534 - 28391 (+)
Gene ID: HRGMv2_0033_8_22
Type: TC
Location: 28391 - 29203 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0033_8_14 vegetarian > omnivore 1.93784 0.00924

🧭 Explore Read Mapping of CGC

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