Cluster: HRGMv2_0033_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0033
- CGC Family ID: CGCFAM_03973
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0033_6 | HRGMv2_0033_6_75 | 81204 | 82010 | + | CE4 |
| pfam | HRGMv2_0033_6 | HRGMv2_0033_6_76 | 82007 | 82615 | + | Pept_tRNA_hydro |
| STP | HRGMv2_0033_6 | HRGMv2_0033_6_77 | 82872 | 83453 | - | NUDIX |
| TC | HRGMv2_0033_6 | HRGMv2_0033_6_78 | 83672 | 86299 | - | 3.A.3.2.22 |
Gene ID: HRGMv2_0033_6_75
Type: CAZyme
Location: 81204 - 82010 (+)
Type: CAZyme
Location: 81204 - 82010 (+)
Gene ID: HRGMv2_0033_6_76
Type: pfam
Location: 82007 - 82615 (+)
Type: pfam
Location: 82007 - 82615 (+)
Gene ID: HRGMv2_0033_6_77
Type: STP
Location: 82872 - 83453 (-)
Type: STP
Location: 82872 - 83453 (-)
Gene ID: HRGMv2_0033_6_78
Type: TC
Location: 83672 - 86299 (-)
Type: TC
Location: 83672 - 86299 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.