Cluster: HRGMv2_0033_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0033
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0033_5 | HRGMv2_0033_5_29 | 30829 | 31965 | + | GT19 |
| TC | HRGMv2_0033_5 | HRGMv2_0033_5_30 | 31962 | 33695 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_0033_5 | HRGMv2_0033_5_31 | 33715 | 36243 | + | GT30 |
Gene ID: HRGMv2_0033_5_29
Type: CAZyme
Location: 30829 - 31965 (+)
Type: CAZyme
Location: 30829 - 31965 (+)
Gene ID: HRGMv2_0033_5_30
Type: TC
Location: 31962 - 33695 (+)
Type: TC
Location: 31962 - 33695 (+)
Gene ID: HRGMv2_0033_5_31
Type: CAZyme
Location: 33715 - 36243 (+)
Type: CAZyme
Location: 33715 - 36243 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.