Cluster: HRGMv2_0033_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0033
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0033_29 | HRGMv2_0033_29_7 | 4782 | 5885 | - | GT28 |
| pfam | HRGMv2_0033_29 | HRGMv2_0033_29_8 | 5901 | 7262 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0033_29 | HRGMv2_0033_29_9 | 7295 | 8278 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0033_29_7
Type: CAZyme
Location: 4782 - 5885 (-)
Type: CAZyme
Location: 4782 - 5885 (-)
Gene ID: HRGMv2_0033_29_8
Type: pfam
Location: 5901 - 7262 (-)
Type: pfam
Location: 5901 - 7262 (-)
Gene ID: HRGMv2_0033_29_9
Type: TC
Location: 7295 - 8278 (-)
Type: TC
Location: 7295 - 8278 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.