Cluster: HRGMv2_0033_CGC1
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0033
- CGC Family ID: CGCFAM_05351
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0033_1 | HRGMv2_0033_1_196 | 209576 | 212665 | + | 2.A.6.3.5 |
| pfam | HRGMv2_0033_1 | HRGMv2_0033_1_197 | 212722 | 213639 | + | RNase_HII |
| pfam | HRGMv2_0033_1 | HRGMv2_0033_1_198 | 213794 | 214645 | + | YdjC |
| TC | HRGMv2_0033_1 | HRGMv2_0033_1_199 | 214645 | 215646 | + | 4.D.2.1.4 |
| CAZyme | HRGMv2_0033_1 | HRGMv2_0033_1_200 | 215694 | 217253 | + | GT83 |
Gene ID: HRGMv2_0033_1_196
Type: TC
Location: 209576 - 212665 (+)
Type: TC
Location: 209576 - 212665 (+)
Gene ID: HRGMv2_0033_1_197
Type: pfam
Location: 212722 - 213639 (+)
Type: pfam
Location: 212722 - 213639 (+)
Gene ID: HRGMv2_0033_1_198
Type: pfam
Location: 213794 - 214645 (+)
Type: pfam
Location: 213794 - 214645 (+)
Gene ID: HRGMv2_0033_1_199
Type: TC
Location: 214645 - 215646 (+)
Type: TC
Location: 214645 - 215646 (+)
Gene ID: HRGMv2_0033_1_200
Type: CAZyme
Location: 215694 - 217253 (+)
Type: CAZyme
Location: 215694 - 217253 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.