Cluster: HRGMv2_0032_CGC7
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0032
- CGC Family ID: CGCFAM_03973
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0032_56 | HRGMv2_0032_56_3 | 1469 | 4096 | + | 3.A.3.2.22 |
| pfam | HRGMv2_0032_56 | HRGMv2_0032_56_4 | 4222 | 4830 | - | Pept_tRNA_hydro |
| CAZyme | HRGMv2_0032_56 | HRGMv2_0032_56_5 | 4827 | 5624 | - | CE4 |
Gene ID: HRGMv2_0032_56_3
Type: TC
Location: 1469 - 4096 (+)
Type: TC
Location: 1469 - 4096 (+)
Gene ID: HRGMv2_0032_56_4
Type: pfam
Location: 4222 - 4830 (-)
Type: pfam
Location: 4222 - 4830 (-)
Gene ID: HRGMv2_0032_56_5
Type: CAZyme
Location: 4827 - 5624 (-)
Type: CAZyme
Location: 4827 - 5624 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.