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Cluster: HRGMv2_0032_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0032_33 HRGMv2_0032_33_6 5610 7202 + GT83
TC HRGMv2_0032_33 HRGMv2_0032_33_7 7548 8891 + 2.A.25.1.4
TC HRGMv2_0032_33 HRGMv2_0032_33_8 10066 11223 + 3.A.1.4.8
TC HRGMv2_0032_33 HRGMv2_0032_33_9 11302 12222 + 3.A.1.4.10
TC HRGMv2_0032_33 HRGMv2_0032_33_10 12225 13292 + 3.A.1.4.10
TC HRGMv2_0032_33 HRGMv2_0032_33_11 13289 14071 + 3.A.1.4.10
TC HRGMv2_0032_33 HRGMv2_0032_33_12 14071 14781 + 3.A.1.4.10
TC HRGMv2_0032_33 HRGMv2_0032_33_13 14881 15705 + 3.A.1.26.7
TC HRGMv2_0032_33 HRGMv2_0032_33_14 15696 16553 + 3.A.1.26.9
TC HRGMv2_0032_33 HRGMv2_0032_33_15 16553 17365 + 3.A.1.25.6
Gene ID: HRGMv2_0032_33_6
Type: CAZyme
Location: 5610 - 7202 (+)
Gene ID: HRGMv2_0032_33_7
Type: TC
Location: 7548 - 8891 (+)
Gene ID: HRGMv2_0032_33_8
Type: TC
Location: 10066 - 11223 (+)
Gene ID: HRGMv2_0032_33_9
Type: TC
Location: 11302 - 12222 (+)
Gene ID: HRGMv2_0032_33_10
Type: TC
Location: 12225 - 13292 (+)
Gene ID: HRGMv2_0032_33_11
Type: TC
Location: 13289 - 14071 (+)
Gene ID: HRGMv2_0032_33_12
Type: TC
Location: 14071 - 14781 (+)
Gene ID: HRGMv2_0032_33_13
Type: TC
Location: 14881 - 15705 (+)
Gene ID: HRGMv2_0032_33_14
Type: TC
Location: 15696 - 16553 (+)
Gene ID: HRGMv2_0032_33_15
Type: TC
Location: 16553 - 17365 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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