Cluster: HRGMv2_0032_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0032
- Continent: North America
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0032_1 | HRGMv2_0032_1_114 | 120173 | 121309 | + | GT19 |
| TC | HRGMv2_0032_1 | HRGMv2_0032_1_115 | 121306 | 123039 | + | 3.A.1.106.2 |
| CAZyme | HRGMv2_0032_1 | HRGMv2_0032_1_116 | 123059 | 125587 | + | GT30 |
Gene ID: HRGMv2_0032_1_114
Type: CAZyme
Location: 120173 - 121309 (+)
Type: CAZyme
Location: 120173 - 121309 (+)
Gene ID: HRGMv2_0032_1_115
Type: TC
Location: 121306 - 123039 (+)
Type: TC
Location: 121306 - 123039 (+)
Gene ID: HRGMv2_0032_1_116
Type: CAZyme
Location: 123059 - 125587 (+)
Type: CAZyme
Location: 123059 - 125587 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.