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Cluster: HRGMv2_0031_CGC9

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0031_62 HRGMv2_0031_62_2 462 1982 - 2.A.66.1.40
CAZyme HRGMv2_0031_62 HRGMv2_0031_62_3 2534 3067 - GT2
CAZyme HRGMv2_0031_62 HRGMv2_0031_62_4 3099 3842 - GT32
pfam HRGMv2_0031_62 HRGMv2_0031_62_5 3878 5062 - Capsule_synth
NULL(UNKNOWN) HRGMv2_0031_62 HRGMv2_0031_62_6 5085 5972 - NULL(UNKNOWN)
[View Structural Homologs]
CAZyme HRGMv2_0031_62 HRGMv2_0031_62_7 5998 7092 - GT4
TC HRGMv2_0031_62 HRGMv2_0031_62_8 7092 8522 - 9.B.18.1.3
TC HRGMv2_0031_62 HRGMv2_0031_62_9 8766 9587 - 3.A.1.24.5
Gene ID: HRGMv2_0031_62_2
Type: TC
Location: 462 - 1982 (-)
Gene ID: HRGMv2_0031_62_3
Type: CAZyme
Location: 2534 - 3067 (-)
Gene ID: HRGMv2_0031_62_4
Type: CAZyme
Location: 3099 - 3842 (-)
Gene ID: HRGMv2_0031_62_5
Type: pfam
Location: 3878 - 5062 (-)
Gene ID: HRGMv2_0031_62_6
Type:
Location: 5085 - 5972 (-)
Gene ID: HRGMv2_0031_62_7
Type: CAZyme
Location: 5998 - 7092 (-)
Gene ID: HRGMv2_0031_62_8
Type: TC
Location: 7092 - 8522 (-)
Gene ID: HRGMv2_0031_62_9
Type: TC
Location: 8766 - 9587 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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