Cluster: HRGMv2_0031_CGC6
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 4
- Substrate:
- Genome ID: HRGMv2_0031
- CGC Family ID: CGCFAM_00348
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0031_12 | HRGMv2_0031_12_25 | 22599 | 23360 | + | GT111 |
| CAZyme | HRGMv2_0031_12 | HRGMv2_0031_12_26 | 23371 | 24459 | + | GT4 |
| CAZyme | HRGMv2_0031_12 | HRGMv2_0031_12_27 | 24452 | 25456 | + | GT2 |
| CAZyme | HRGMv2_0031_12 | HRGMv2_0031_12_28 | 25470 | 26531 | + | GT113 |
| TC | HRGMv2_0031_12 | HRGMv2_0031_12_29 | 26555 | 27826 | + | 2.A.66.2.10 |
Gene ID: HRGMv2_0031_12_25
Type: CAZyme
Location: 22599 - 23360 (+)
Type: CAZyme
Location: 22599 - 23360 (+)
Gene ID: HRGMv2_0031_12_26
Type: CAZyme
Location: 23371 - 24459 (+)
Type: CAZyme
Location: 23371 - 24459 (+)
Gene ID: HRGMv2_0031_12_27
Type: CAZyme
Location: 24452 - 25456 (+)
Type: CAZyme
Location: 24452 - 25456 (+)
Gene ID: HRGMv2_0031_12_28
Type: CAZyme
Location: 25470 - 26531 (+)
Type: CAZyme
Location: 25470 - 26531 (+)
Gene ID: HRGMv2_0031_12_29
Type: TC
Location: 26555 - 27826 (+)
Type: TC
Location: 26555 - 27826 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.