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Cluster: HRGMv2_0031_CGC5

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0031_6 HRGMv2_0031_6_47 45789 46559 - GT111
pfam HRGMv2_0031_6 HRGMv2_0031_6_48 46556 47560 - Acyl_transf_3
STP HRGMv2_0031_6 HRGMv2_0031_6_49 47553 48674 - Pyr_redox
TC HRGMv2_0031_6 HRGMv2_0031_6_50 48702 50144 - 9.B.18.1.2
CAZyme HRGMv2_0031_6 HRGMv2_0031_6_51 50411 51961 - GT83
pfam HRGMv2_0031_6 HRGMv2_0031_6_52 51954 52892 - 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
TC HRGMv2_0031_6 HRGMv2_0031_6_53 52889 53896 - 4.D.2.1.4
Gene ID: HRGMv2_0031_6_47
Type: CAZyme
Location: 45789 - 46559 (-)
Gene ID: HRGMv2_0031_6_48
Type: pfam
Location: 46556 - 47560 (-)
Gene ID: HRGMv2_0031_6_49
Type: STP
Location: 47553 - 48674 (-)
Gene ID: HRGMv2_0031_6_50
Type: TC
Location: 48702 - 50144 (-)
Gene ID: HRGMv2_0031_6_51
Type: CAZyme
Location: 50411 - 51961 (-)
Gene ID: HRGMv2_0031_6_52
Type: pfam
Location: 51954 - 52892 (-)
Gene ID: HRGMv2_0031_6_53
Type: TC
Location: 52889 - 53896 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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Differentially Abundant Genes

Gene ID Condition Pair log2FC FDR P-value
HRGMv2_0031_6_49 vegan > omnivore 3.01819 0.01557

🧭 Explore Read Mapping of CGC

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