Cluster: HRGMv2_0031_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0031
- CGC Family ID: CGCFAM_00015
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0031_6 | HRGMv2_0031_6_40 | 37798 | 39318 | - | 2.A.66.1.40 |
| pfam | HRGMv2_0031_6 | HRGMv2_0031_6_41 | 39309 | 40886 | - | Wzy_C |
| CAZyme | HRGMv2_0031_6 | HRGMv2_0031_6_42 | 40915 | 41931 | - | GT2 |
| CAZyme | HRGMv2_0031_6 | HRGMv2_0031_6_43 | 41938 | 43182 | - | GT9 |
Gene ID: HRGMv2_0031_6_40
Type: TC
Location: 37798 - 39318 (-)
Type: TC
Location: 37798 - 39318 (-)
Gene ID: HRGMv2_0031_6_41
Type: pfam
Location: 39309 - 40886 (-)
Type: pfam
Location: 39309 - 40886 (-)
Gene ID: HRGMv2_0031_6_42
Type: CAZyme
Location: 40915 - 41931 (-)
Type: CAZyme
Location: 40915 - 41931 (-)
Gene ID: HRGMv2_0031_6_43
Type: CAZyme
Location: 41938 - 43182 (-)
Type: CAZyme
Location: 41938 - 43182 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.