Cluster: HRGMv2_0031_CGC2
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0031
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0031_3 | HRGMv2_0031_3_19 | 19208 | 19987 | - | 9.B.10.1.1 |
| pfam | HRGMv2_0031_3 | HRGMv2_0031_3_20 | 19987 | 20346 | - | PTPS |
| pfam | HRGMv2_0031_3 | HRGMv2_0031_3_21 | 20364 | 20828 | - | SpoU_methylase |
| CAZyme | HRGMv2_0031_3 | HRGMv2_0031_3_22 | 20894 | 21985 | - | GH73 |
Gene ID: HRGMv2_0031_3_19
Type: TC
Location: 19208 - 19987 (-)
Type: TC
Location: 19208 - 19987 (-)
Gene ID: HRGMv2_0031_3_20
Type: pfam
Location: 19987 - 20346 (-)
Type: pfam
Location: 19987 - 20346 (-)
Gene ID: HRGMv2_0031_3_21
Type: pfam
Location: 20364 - 20828 (-)
Type: pfam
Location: 20364 - 20828 (-)
Gene ID: HRGMv2_0031_3_22
Type: CAZyme
Location: 20894 - 21985 (-)
Type: CAZyme
Location: 20894 - 21985 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.