Cluster: HRGMv2_0031_CGC12
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0031
- CGC Family ID: CGCFAM_08685
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0031_81 | HRGMv2_0031_81_3 | 2044 | 3282 | - | GH171 |
| TC | HRGMv2_0031_81 | HRGMv2_0031_81_4 | 3468 | 4499 | + | 3.A.1.11.1 |
| TC | HRGMv2_0031_81 | HRGMv2_0031_81_5 | 4496 | 5356 | + | 3.A.1.11.1 |
| TC | HRGMv2_0031_81 | HRGMv2_0031_81_6 | 5337 | 6134 | + | 3.A.1.11.1 |
| TC | HRGMv2_0031_81 | HRGMv2_0031_81_7 | 6196 | 7266 | + | 3.A.1.11.1 |
Gene ID: HRGMv2_0031_81_3
Type: CAZyme
Location: 2044 - 3282 (-)
Type: CAZyme
Location: 2044 - 3282 (-)
Gene ID: HRGMv2_0031_81_4
Type: TC
Location: 3468 - 4499 (+)
Type: TC
Location: 3468 - 4499 (+)
Gene ID: HRGMv2_0031_81_5
Type: TC
Location: 4496 - 5356 (+)
Type: TC
Location: 4496 - 5356 (+)
Gene ID: HRGMv2_0031_81_6
Type: TC
Location: 5337 - 6134 (+)
Type: TC
Location: 5337 - 6134 (+)
Gene ID: HRGMv2_0031_81_7
Type: TC
Location: 6196 - 7266 (+)
Type: TC
Location: 6196 - 7266 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.