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Cluster: HRGMv2_0028_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0028_9 HRGMv2_0028_9_32 33859 35289 + 9.B.18.1.2
pfam HRGMv2_0028_9 HRGMv2_0028_9_33 35322 36419 + Amino_oxidase | GLF | NAD_binding_8
CAZyme HRGMv2_0028_9 HRGMv2_0028_9_34 36424 37185 + GT111
pfam HRGMv2_0028_9 HRGMv2_0028_9_35 37203 38048 + LicD
pfam HRGMv2_0028_9 HRGMv2_0028_9_36 38051 39418 + adh_short | NTP_transferase | IspD | Epimerase | KR | NTP_transf_3 | adh_short_C2
CAZyme HRGMv2_0028_9 HRGMv2_0028_9_37 39428 40393 + GT2
CAZyme HRGMv2_0028_9 HRGMv2_0028_9_38 40446 41453 + GT2
TC HRGMv2_0028_9 HRGMv2_0028_9_39 41570 42694 + 2.A.66.2.10
Gene ID: HRGMv2_0028_9_32
Type: TC
Location: 33859 - 35289 (+)
Gene ID: HRGMv2_0028_9_33
Type: pfam
Location: 35322 - 36419 (+)
Gene ID: HRGMv2_0028_9_34
Type: CAZyme
Location: 36424 - 37185 (+)
Gene ID: HRGMv2_0028_9_35
Type: pfam
Location: 37203 - 38048 (+)
Gene ID: HRGMv2_0028_9_36
Type: pfam
Location: 38051 - 39418 (+)
Gene ID: HRGMv2_0028_9_37
Type: CAZyme
Location: 39428 - 40393 (+)
Gene ID: HRGMv2_0028_9_38
Type: CAZyme
Location: 40446 - 41453 (+)
Gene ID: HRGMv2_0028_9_39
Type: TC
Location: 41570 - 42694 (+)

Taxonomic Lineage

Domain
Bacteria
→
Phylum
Bacillota_C
→
Class
Negativicutes
→
Order
Acidaminococcales
→
Family
Acidaminococcaceae
→
Genus
CAG-266
→

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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