Cluster: HRGMv2_0028_CGC4
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0028
- CGC Family ID: CGCFAM_00056
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0028_5 | HRGMv2_0028_5_89 | 84019 | 84930 | + | 2.A.7.2.1 |
| TF | HRGMv2_0028_5 | HRGMv2_0028_5_90 | 85017 | 85685 | + | Trans_reg_C |
| STP | HRGMv2_0028_5 | HRGMv2_0028_5_91 | 85687 | 86946 | + | HATPase_c | HisKA |
| CAZyme | HRGMv2_0028_5 | HRGMv2_0028_5_92 | 87065 | 88675 | + | GT83 |
Gene ID: HRGMv2_0028_5_89
Type: TC
Location: 84019 - 84930 (+)
Type: TC
Location: 84019 - 84930 (+)
Gene ID: HRGMv2_0028_5_90
Type: TF
Location: 85017 - 85685 (+)
Type: TF
Location: 85017 - 85685 (+)
Gene ID: HRGMv2_0028_5_91
Type: STP
Location: 85687 - 86946 (+)
Type: STP
Location: 85687 - 86946 (+)
Gene ID: HRGMv2_0028_5_92
Type: CAZyme
Location: 87065 - 88675 (+)
Type: CAZyme
Location: 87065 - 88675 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
CAG-266
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.