Cluster: HRGMv2_0028_CGC12
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0028
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0028_15 | HRGMv2_0028_15_10 | 7327 | 8301 | + | 9.B.146.1.6 |
| pfam | HRGMv2_0028_15 | HRGMv2_0028_15_11 | 8304 | 9668 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | HRGMv2_0028_15 | HRGMv2_0028_15_12 | 9665 | 10768 | + | GT28 |
Gene ID: HRGMv2_0028_15_10
Type: TC
Location: 7327 - 8301 (+)
Type: TC
Location: 7327 - 8301 (+)
Gene ID: HRGMv2_0028_15_11
Type: pfam
Location: 8304 - 9668 (+)
Type: pfam
Location: 8304 - 9668 (+)
Gene ID: HRGMv2_0028_15_12
Type: CAZyme
Location: 9665 - 10768 (+)
Type: CAZyme
Location: 9665 - 10768 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
CAG-266
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.