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Cluster: HRGMv2_0027_CGC8

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0027_3 HRGMv2_0027_3_129 154932 155939 - GT8
pfam HRGMv2_0027_3 HRGMv2_0027_3_130 156078 157127 + adh_short | 3Beta_HSD | Epimerase | Polysacc_synt_2 | RmlD_sub_bind | NAD_binding_4 | GDP_Man_Dehyd
pfam HRGMv2_0027_3 HRGMv2_0027_3_131 157283 159076 - Sulfatase
CAZyme HRGMv2_0027_3 HRGMv2_0027_3_132 159273 160220 + GT8
TC HRGMv2_0027_3 HRGMv2_0027_3_133 160243 161010 + 4.D.1.3.2
TC HRGMv2_0027_3 HRGMv2_0027_3_134 161023 162471 + 9.B.18.1.2
pfam HRGMv2_0027_3 HRGMv2_0027_3_135 162481 162870 + GtrA_DPMS_TM
pfam HRGMv2_0027_3 HRGMv2_0027_3_136 163000 163197 - ESPR
TC HRGMv2_0027_3 HRGMv2_0027_3_137 163526 164842 - 2.A.23.2.11
TF HRGMv2_0027_3 HRGMv2_0027_3_138 165126 165743 - GerE
STP HRGMv2_0027_3 HRGMv2_0027_3_139 165916 167103 - HhH-GPD
TC HRGMv2_0027_3 HRGMv2_0027_3_140 167561 168988 + 2.A.25.1.4
NULL(UNKNOWN) HRGMv2_0027_3 HRGMv2_0027_3_141 169254 170648 - NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0027_3 HRGMv2_0027_3_142 170658 174098 - 3.B.1.1.1
TC HRGMv2_0027_3 HRGMv2_0027_3_143 174388 176508 + 3.A.16.1.2
TC HRGMv2_0027_3 HRGMv2_0027_3_144 176687 177637 - 2.A.115.1.2
Gene ID: HRGMv2_0027_3_129
Type: CAZyme
Location: 154932 - 155939 (-)
Gene ID: HRGMv2_0027_3_130
Type: pfam
Location: 156078 - 157127 (+)
Gene ID: HRGMv2_0027_3_131
Type: pfam
Location: 157283 - 159076 (-)
Gene ID: HRGMv2_0027_3_132
Type: CAZyme
Location: 159273 - 160220 (+)
Gene ID: HRGMv2_0027_3_133
Type: TC
Location: 160243 - 161010 (+)
Gene ID: HRGMv2_0027_3_134
Type: TC
Location: 161023 - 162471 (+)
Gene ID: HRGMv2_0027_3_135
Type: pfam
Location: 162481 - 162870 (+)
Gene ID: HRGMv2_0027_3_136
Type: pfam
Location: 163000 - 163197 (-)
Gene ID: HRGMv2_0027_3_137
Type: TC
Location: 163526 - 164842 (-)
Gene ID: HRGMv2_0027_3_138
Type: TF
Location: 165126 - 165743 (-)
Gene ID: HRGMv2_0027_3_139
Type: STP
Location: 165916 - 167103 (-)
Gene ID: HRGMv2_0027_3_140
Type: TC
Location: 167561 - 168988 (+)
Gene ID: HRGMv2_0027_3_141
Type:
Location: 169254 - 170648 (-)
Gene ID: HRGMv2_0027_3_142
Type: TC
Location: 170658 - 174098 (-)
Gene ID: HRGMv2_0027_3_143
Type: TC
Location: 174388 - 176508 (+)
Gene ID: HRGMv2_0027_3_144
Type: TC
Location: 176687 - 177637 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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