Cluster: HRGMv2_0027_CGC6
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0027
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0027_2 | HRGMv2_0027_2_211 | 236227 | 237792 | + | GT83 |
| CAZyme | HRGMv2_0027_2 | HRGMv2_0027_2_212 | 237804 | 239042 | + | GT2 |
| TF | HRGMv2_0027_2 | HRGMv2_0027_2_213 | 239045 | 240208 | + | SfsA |
| TC | HRGMv2_0027_2 | HRGMv2_0027_2_214 | 240311 | 240931 | + | 9.B.105.1.7 |
Gene ID: HRGMv2_0027_2_211
Type: CAZyme
Location: 236227 - 237792 (+)
Type: CAZyme
Location: 236227 - 237792 (+)
Gene ID: HRGMv2_0027_2_212
Type: CAZyme
Location: 237804 - 239042 (+)
Type: CAZyme
Location: 237804 - 239042 (+)
Gene ID: HRGMv2_0027_2_213
Type: TF
Location: 239045 - 240208 (+)
Type: TF
Location: 239045 - 240208 (+)
Gene ID: HRGMv2_0027_2_214
Type: TC
Location: 240311 - 240931 (+)
Type: TC
Location: 240311 - 240931 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900314855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.