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Cluster: HRGMv2_0027_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0027_1 HRGMv2_0027_1_123 142847 144337 - 2.A.80.1.1
pfam HRGMv2_0027_1 HRGMv2_0027_1_124 144353 144823 - TctB
TC HRGMv2_0027_1 HRGMv2_0027_1_125 144927 145886 - 2.A.80.1.3
CAZyme HRGMv2_0027_1 HRGMv2_0027_1_126 146072 147142 - GH33
pfam HRGMv2_0027_1 HRGMv2_0027_1_127 147268 148356 - Aminotran_5
pfam HRGMv2_0027_1 HRGMv2_0027_1_128 148380 149630 - DUF1015
TC HRGMv2_0027_1 HRGMv2_0027_1_129 149809 151533 - 3.A.3.6.14
pfam HRGMv2_0027_1 HRGMv2_0027_1_130 151705 153093 + AMMECR1 | LigB
pfam HRGMv2_0027_1 HRGMv2_0027_1_131 153155 153982 + Radical_SAM
CAZyme HRGMv2_0027_1 HRGMv2_0027_1_132 154108 154908 - CE4
Gene ID: HRGMv2_0027_1_123
Type: TC
Location: 142847 - 144337 (-)
Gene ID: HRGMv2_0027_1_124
Type: pfam
Location: 144353 - 144823 (-)
Gene ID: HRGMv2_0027_1_125
Type: TC
Location: 144927 - 145886 (-)
Gene ID: HRGMv2_0027_1_126
Type: CAZyme
Location: 146072 - 147142 (-)
Gene ID: HRGMv2_0027_1_127
Type: pfam
Location: 147268 - 148356 (-)
Gene ID: HRGMv2_0027_1_128
Type: pfam
Location: 148380 - 149630 (-)
Gene ID: HRGMv2_0027_1_129
Type: TC
Location: 149809 - 151533 (-)
Gene ID: HRGMv2_0027_1_130
Type: pfam
Location: 151705 - 153093 (+)
Gene ID: HRGMv2_0027_1_131
Type: pfam
Location: 153155 - 153982 (+)
Gene ID: HRGMv2_0027_1_132
Type: CAZyme
Location: 154108 - 154908 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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