Cluster: HRGMv2_0027_CGC2
🧬 Cluster Details
- Gene Count: 7
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0027
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0027_1 | HRGMv2_0027_1_90 | 107252 | 108259 | + | GT51 |
| pfam | HRGMv2_0027_1 | HRGMv2_0027_1_91 | 108405 | 109580 | - | AICARFT_IMPCHas |
| pfam | HRGMv2_0027_1 | HRGMv2_0027_1_92 | 109793 | 110704 | + | Radical_SAM | Fer4_12 |
| TC | HRGMv2_0027_1 | HRGMv2_0027_1_93 | 110820 | 111977 | - | 9.B.174.1.1 |
| STP | HRGMv2_0027_1 | HRGMv2_0027_1_94 | 112003 | 113166 | - | Peptidase_M23 |
| pfam | HRGMv2_0027_1 | HRGMv2_0027_1_95 | 113179 | 114066 | - | FtsX | FtsX_ECD |
| TC | HRGMv2_0027_1 | HRGMv2_0027_1_96 | 114050 | 114766 | - | 3.A.1.140.1 |
Gene ID: HRGMv2_0027_1_90
Type: CAZyme
Location: 107252 - 108259 (+)
Type: CAZyme
Location: 107252 - 108259 (+)
Gene ID: HRGMv2_0027_1_91
Type: pfam
Location: 108405 - 109580 (-)
Type: pfam
Location: 108405 - 109580 (-)
Gene ID: HRGMv2_0027_1_92
Type: pfam
Location: 109793 - 110704 (+)
Type: pfam
Location: 109793 - 110704 (+)
Gene ID: HRGMv2_0027_1_93
Type: TC
Location: 110820 - 111977 (-)
Type: TC
Location: 110820 - 111977 (-)
Gene ID: HRGMv2_0027_1_94
Type: STP
Location: 112003 - 113166 (-)
Type: STP
Location: 112003 - 113166 (-)
Gene ID: HRGMv2_0027_1_95
Type: pfam
Location: 113179 - 114066 (-)
Type: pfam
Location: 113179 - 114066 (-)
Gene ID: HRGMv2_0027_1_96
Type: TC
Location: 114050 - 114766 (-)
Type: TC
Location: 114050 - 114766 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900314855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.