Cluster: HRGMv2_0027_CGC10
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0027
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0027_5 | HRGMv2_0027_5_66 | 76355 | 77473 | - | GT28 |
| pfam | HRGMv2_0027_5 | HRGMv2_0027_5_67 | 77470 | 78924 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0027_5 | HRGMv2_0027_5_68 | 78933 | 79922 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0027_5_66
Type: CAZyme
Location: 76355 - 77473 (-)
Type: CAZyme
Location: 76355 - 77473 (-)
Gene ID: HRGMv2_0027_5_67
Type: pfam
Location: 77470 - 78924 (-)
Type: pfam
Location: 77470 - 78924 (-)
Gene ID: HRGMv2_0027_5_68
Type: TC
Location: 78933 - 79922 (-)
Type: TC
Location: 78933 - 79922 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Succiniclasticum
Species
Succiniclasticum sp900314855
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.