Cluster: HRGMv2_0026_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0026
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0026_10 | HRGMv2_0026_10_56 | 60601 | 62106 | - | 3.A.7.19.1 |
| CAZyme | HRGMv2_0026_10 | HRGMv2_0026_10_57 | 62246 | 63175 | + | GT2 |
| pfam | HRGMv2_0026_10 | HRGMv2_0026_10_58 | 63216 | 64160 | - | T2SSF |
| TC | HRGMv2_0026_10 | HRGMv2_0026_10_59 | 64169 | 65566 | - | 3.A.7.18.1 |
Gene ID: HRGMv2_0026_10_56
Type: TC
Location: 60601 - 62106 (-)
Type: TC
Location: 60601 - 62106 (-)
Gene ID: HRGMv2_0026_10_57
Type: CAZyme
Location: 62246 - 63175 (+)
Type: CAZyme
Location: 62246 - 63175 (+)
Gene ID: HRGMv2_0026_10_58
Type: pfam
Location: 63216 - 64160 (-)
Type: pfam
Location: 63216 - 64160 (-)
Gene ID: HRGMv2_0026_10_59
Type: TC
Location: 64169 - 65566 (-)
Type: TC
Location: 64169 - 65566 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.