Cluster: HRGMv2_0026_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0026
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0026_2 | HRGMv2_0026_2_159 | 161324 | 162427 | - | GT28 |
| pfam | HRGMv2_0026_2 | HRGMv2_0026_2_160 | 162444 | 163820 | - | Mur_ligase_C | Mur_ligase_M |
| TC | HRGMv2_0026_2 | HRGMv2_0026_2_161 | 163837 | 164799 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0026_2_159
Type: CAZyme
Location: 161324 - 162427 (-)
Type: CAZyme
Location: 161324 - 162427 (-)
Gene ID: HRGMv2_0026_2_160
Type: pfam
Location: 162444 - 163820 (-)
Type: pfam
Location: 162444 - 163820 (-)
Gene ID: HRGMv2_0026_2_161
Type: TC
Location: 163837 - 164799 (-)
Type: TC
Location: 163837 - 164799 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.