Cluster: HRGMv2_0026_CGC3
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0026
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0026_1 | HRGMv2_0026_1_181 | 193924 | 195069 | + | GT28 |
| TC | HRGMv2_0026_1 | HRGMv2_0026_1_182 | 195161 | 196306 | + | 3.A.11.1.3 |
| TC | HRGMv2_0026_1 | HRGMv2_0026_1_183 | 196318 | 198480 | + | 3.A.7.7.1 |
Gene ID: HRGMv2_0026_1_181
Type: CAZyme
Location: 193924 - 195069 (+)
Type: CAZyme
Location: 193924 - 195069 (+)
Gene ID: HRGMv2_0026_1_182
Type: TC
Location: 195161 - 196306 (+)
Type: TC
Location: 195161 - 196306 (+)
Gene ID: HRGMv2_0026_1_183
Type: TC
Location: 196318 - 198480 (+)
Type: TC
Location: 196318 - 198480 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.