Cluster: HRGMv2_0026_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0026
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0026_1 | HRGMv2_0026_1_32 | 34675 | 35568 | + | GH73 |
| pfam | HRGMv2_0026_1 | HRGMv2_0026_1_33 | 35571 | 36053 | + | SpoU_methylase |
| pfam | HRGMv2_0026_1 | HRGMv2_0026_1_34 | 36050 | 36406 | + | PTPS |
| TC | HRGMv2_0026_1 | HRGMv2_0026_1_35 | 36381 | 37175 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_0026_1_32
Type: CAZyme
Location: 34675 - 35568 (+)
Type: CAZyme
Location: 34675 - 35568 (+)
Gene ID: HRGMv2_0026_1_33
Type: pfam
Location: 35571 - 36053 (+)
Type: pfam
Location: 35571 - 36053 (+)
Gene ID: HRGMv2_0026_1_34
Type: pfam
Location: 36050 - 36406 (+)
Type: pfam
Location: 36050 - 36406 (+)
Gene ID: HRGMv2_0026_1_35
Type: TC
Location: 36381 - 37175 (+)
Type: TC
Location: 36381 - 37175 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.