Cluster: HRGMv2_0025_CGC7
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0025
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0025_10 | HRGMv2_0025_10_5 | 2728 | 3627 | + | GH73 |
| pfam | HRGMv2_0025_10 | HRGMv2_0025_10_6 | 3627 | 4109 | + | SpoU_methylase |
| pfam | HRGMv2_0025_10 | HRGMv2_0025_10_7 | 4106 | 4462 | + | PTPS |
| TC | HRGMv2_0025_10 | HRGMv2_0025_10_8 | 4464 | 5231 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_0025_10_5
Type: CAZyme
Location: 2728 - 3627 (+)
Type: CAZyme
Location: 2728 - 3627 (+)
Gene ID: HRGMv2_0025_10_6
Type: pfam
Location: 3627 - 4109 (+)
Type: pfam
Location: 3627 - 4109 (+)
Gene ID: HRGMv2_0025_10_7
Type: pfam
Location: 4106 - 4462 (+)
Type: pfam
Location: 4106 - 4462 (+)
Gene ID: HRGMv2_0025_10_8
Type: TC
Location: 4464 - 5231 (+)
Type: TC
Location: 4464 - 5231 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.