Cluster: HRGMv2_0025_CGC6
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0025
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0025_8 | HRGMv2_0025_8_39 | 41420 | 42382 | + | 9.B.146.1.6 |
| pfam | HRGMv2_0025_8 | HRGMv2_0025_8_40 | 42398 | 43774 | + | Mur_ligase_C | Mur_ligase_M |
| CAZyme | HRGMv2_0025_8 | HRGMv2_0025_8_41 | 43791 | 44894 | + | GT28 |
Gene ID: HRGMv2_0025_8_39
Type: TC
Location: 41420 - 42382 (+)
Type: TC
Location: 41420 - 42382 (+)
Gene ID: HRGMv2_0025_8_40
Type: pfam
Location: 42398 - 43774 (+)
Type: pfam
Location: 42398 - 43774 (+)
Gene ID: HRGMv2_0025_8_41
Type: CAZyme
Location: 43791 - 44894 (+)
Type: CAZyme
Location: 43791 - 44894 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.