Cluster: HRGMv2_0025_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0025
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0025_4 | HRGMv2_0025_4_13 | 16860 | 19025 | - | 3.A.7.7.1 |
| TC | HRGMv2_0025_4 | HRGMv2_0025_4_14 | 19037 | 20182 | - | 3.A.11.1.3 |
| CAZyme | HRGMv2_0025_4 | HRGMv2_0025_4_15 | 20277 | 21419 | - | GT28 |
Gene ID: HRGMv2_0025_4_13
Type: TC
Location: 16860 - 19025 (-)
Type: TC
Location: 16860 - 19025 (-)
Gene ID: HRGMv2_0025_4_14
Type: TC
Location: 19037 - 20182 (-)
Type: TC
Location: 19037 - 20182 (-)
Gene ID: HRGMv2_0025_4_15
Type: CAZyme
Location: 20277 - 21419 (-)
Type: CAZyme
Location: 20277 - 21419 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.