Cluster: HRGMv2_0025_CGC4
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0025
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0025_3 | HRGMv2_0025_3_50 | 39890 | 42424 | - | GT30 |
| TC | HRGMv2_0025_3 | HRGMv2_0025_3_51 | 42444 | 44177 | - | 3.A.1.106.2 |
| CAZyme | HRGMv2_0025_3 | HRGMv2_0025_3_52 | 44174 | 45310 | - | GT19 |
Gene ID: HRGMv2_0025_3_50
Type: CAZyme
Location: 39890 - 42424 (-)
Type: CAZyme
Location: 39890 - 42424 (-)
Gene ID: HRGMv2_0025_3_51
Type: TC
Location: 42444 - 44177 (-)
Type: TC
Location: 42444 - 44177 (-)
Gene ID: HRGMv2_0025_3_52
Type: CAZyme
Location: 44174 - 45310 (-)
Type: CAZyme
Location: 44174 - 45310 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.