Cluster: HRGMv2_0025_CGC1
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0025
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0025_1 | HRGMv2_0025_1_15 | 14120 | 15145 | - | GH33 |
| pfam | HRGMv2_0025_1 | HRGMv2_0025_1_16 | 15171 | 15488 | - | ParE_toxin |
| pfam | HRGMv2_0025_1 | HRGMv2_0025_1_17 | 15466 | 15756 | - | PhdYeFM_antitox |
| TC | HRGMv2_0025_1 | HRGMv2_0025_1_18 | 16157 | 18121 | - | 1.B.14.1.4 |
| TC | HRGMv2_0025_1 | HRGMv2_0025_1_19 | 18571 | 19404 | - | 3.A.1.14.8 |
| TC | HRGMv2_0025_1 | HRGMv2_0025_1_20 | 19423 | 20457 | - | 3.A.1.14.16 |
Gene ID: HRGMv2_0025_1_15
Type: CAZyme
Location: 14120 - 15145 (-)
Type: CAZyme
Location: 14120 - 15145 (-)
Gene ID: HRGMv2_0025_1_16
Type: pfam
Location: 15171 - 15488 (-)
Type: pfam
Location: 15171 - 15488 (-)
Gene ID: HRGMv2_0025_1_17
Type: pfam
Location: 15466 - 15756 (-)
Type: pfam
Location: 15466 - 15756 (-)
Gene ID: HRGMv2_0025_1_18
Type: TC
Location: 16157 - 18121 (-)
Type: TC
Location: 16157 - 18121 (-)
Gene ID: HRGMv2_0025_1_19
Type: TC
Location: 18571 - 19404 (-)
Type: TC
Location: 18571 - 19404 (-)
Gene ID: HRGMv2_0025_1_20
Type: TC
Location: 19423 - 20457 (-)
Type: TC
Location: 19423 - 20457 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.