Cluster: HRGMv2_0024_CGC9
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0024
- CGC Family ID: CGCFAM_00036
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0024_2 | HRGMv2_0024_2_206 | 211995 | 213407 | + | 9.B.18.1.2 |
| pfam | HRGMv2_0024_2 | HRGMv2_0024_2_207 | 213412 | 214506 | + | Amino_oxidase | GLF | NAD_binding_8 |
| CAZyme | HRGMv2_0024_2 | HRGMv2_0024_2_208 | 214508 | 215263 | + | GT111 |
| CAZyme | HRGMv2_0024_2 | HRGMv2_0024_2_209 | 215271 | 216257 | + | GT2 |
Gene ID: HRGMv2_0024_2_206
Type: TC
Location: 211995 - 213407 (+)
Type: TC
Location: 211995 - 213407 (+)
Gene ID: HRGMv2_0024_2_207
Type: pfam
Location: 213412 - 214506 (+)
Type: pfam
Location: 213412 - 214506 (+)
Gene ID: HRGMv2_0024_2_208
Type: CAZyme
Location: 214508 - 215263 (+)
Type: CAZyme
Location: 214508 - 215263 (+)
Gene ID: HRGMv2_0024_2_209
Type: CAZyme
Location: 215271 - 216257 (+)
Type: CAZyme
Location: 215271 - 216257 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
URXU01
Species
URXU01 sp900552005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.