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Cluster: HRGMv2_0024_CGC3

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0024_1 HRGMv2_0024_1_201 225348 226070 - 3.D.1.4.1
TC HRGMv2_0024_1 HRGMv2_0024_1_202 226081 227586 - 3.D.1.9.3
TC HRGMv2_0024_1 HRGMv2_0024_1_203 227591 229066 - 3.D.1.9.1
NULL(UNKNOWN) HRGMv2_0024_1 HRGMv2_0024_1_204 229071 229700 - NULL(UNKNOWN)
[View Structural Homologs]
pfam HRGMv2_0024_1 HRGMv2_0024_1_205 229711 230595 - NADHdh
TC HRGMv2_0024_1 HRGMv2_0024_1_206 230592 232577 - 3.D.1.9.1
pfam HRGMv2_0024_1 HRGMv2_0024_1_207 232764 233729 - TctC
CAZyme HRGMv2_0024_1 HRGMv2_0024_1_208 233760 234779 - GH33
Gene ID: HRGMv2_0024_1_201
Type: TC
Location: 225348 - 226070 (-)
Gene ID: HRGMv2_0024_1_202
Type: TC
Location: 226081 - 227586 (-)
Gene ID: HRGMv2_0024_1_203
Type: TC
Location: 227591 - 229066 (-)
Gene ID: HRGMv2_0024_1_204
Type:
Location: 229071 - 229700 (-)
Gene ID: HRGMv2_0024_1_205
Type: pfam
Location: 229711 - 230595 (-)
Gene ID: HRGMv2_0024_1_206
Type: TC
Location: 230592 - 232577 (-)
Gene ID: HRGMv2_0024_1_207
Type: pfam
Location: 232764 - 233729 (-)
Gene ID: HRGMv2_0024_1_208
Type: CAZyme
Location: 233760 - 234779 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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