Cluster: HRGMv2_0024_CGC12
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0024
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0024_5 | HRGMv2_0024_5_124 | 114232 | 115443 | - | GH171 |
| pfam | HRGMv2_0024_5 | HRGMv2_0024_5_125 | 115516 | 115866 | - | Glutaredoxin | ArsC |
| TC | HRGMv2_0024_5 | HRGMv2_0024_5_126 | 115882 | 117027 | - | 9.B.174.1.1 |
| STP | HRGMv2_0024_5 | HRGMv2_0024_5_127 | 117050 | 118192 | - | Peptidase_M23 |
| TC | HRGMv2_0024_5 | HRGMv2_0024_5_128 | 118205 | 119098 | - | 3.A.1.140.1 |
| TC | HRGMv2_0024_5 | HRGMv2_0024_5_129 | 119082 | 119768 | - | 3.A.1.140.1 |
Gene ID: HRGMv2_0024_5_124
Type: CAZyme
Location: 114232 - 115443 (-)
Type: CAZyme
Location: 114232 - 115443 (-)
Gene ID: HRGMv2_0024_5_125
Type: pfam
Location: 115516 - 115866 (-)
Type: pfam
Location: 115516 - 115866 (-)
Gene ID: HRGMv2_0024_5_126
Type: TC
Location: 115882 - 117027 (-)
Type: TC
Location: 115882 - 117027 (-)
Gene ID: HRGMv2_0024_5_127
Type: STP
Location: 117050 - 118192 (-)
Type: STP
Location: 117050 - 118192 (-)
Gene ID: HRGMv2_0024_5_128
Type: TC
Location: 118205 - 119098 (-)
Type: TC
Location: 118205 - 119098 (-)
Gene ID: HRGMv2_0024_5_129
Type: TC
Location: 119082 - 119768 (-)
Type: TC
Location: 119082 - 119768 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
URXU01
Species
URXU01 sp900552005
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.