Cluster: HRGMv2_0023_CGC5
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0023
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| TC | HRGMv2_0023_20 | HRGMv2_0023_20_9 | 7976 | 8938 | + | 9.B.146.1.6 |
| pfam | HRGMv2_0023_20 | HRGMv2_0023_20_10 | 8992 | 10347 | + | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| CAZyme | HRGMv2_0023_20 | HRGMv2_0023_20_11 | 10363 | 11466 | + | GT28 |
Gene ID: HRGMv2_0023_20_9
Type: TC
Location: 7976 - 8938 (+)
Type: TC
Location: 7976 - 8938 (+)
Gene ID: HRGMv2_0023_20_10
Type: pfam
Location: 8992 - 10347 (+)
Type: pfam
Location: 8992 - 10347 (+)
Gene ID: HRGMv2_0023_20_11
Type: CAZyme
Location: 10363 - 11466 (+)
Type: CAZyme
Location: 10363 - 11466 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.