Cluster: HRGMv2_0023_CGC1
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0023
- CGC Family ID: CGCFAM_06777
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0023_1 | HRGMv2_0023_1_12 | 9112 | 11643 | - | GT30 |
| TC | HRGMv2_0023_1 | HRGMv2_0023_1_13 | 11663 | 13396 | - | 3.A.1.135.5 |
| CAZyme | HRGMv2_0023_1 | HRGMv2_0023_1_14 | 13393 | 14529 | - | GT19 |
Gene ID: HRGMv2_0023_1_12
Type: CAZyme
Location: 9112 - 11643 (-)
Type: CAZyme
Location: 9112 - 11643 (-)
Gene ID: HRGMv2_0023_1_13
Type: TC
Location: 11663 - 13396 (-)
Type: TC
Location: 11663 - 13396 (-)
Gene ID: HRGMv2_0023_1_14
Type: CAZyme
Location: 13393 - 14529 (-)
Type: CAZyme
Location: 13393 - 14529 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Phascolarctobacterium_A
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.