Cluster: HRGMv2_0016_CGC9
🧬 Cluster Details
- Gene Count: 3
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0016
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0016_32 | HRGMv2_0016_32_15 | 12837 | 13955 | - | GT28 |
| pfam | HRGMv2_0016_32 | HRGMv2_0016_32_16 | 13952 | 15322 | - | Mur_ligase_C | Mur_ligase_M | MurD-like_N |
| TC | HRGMv2_0016_32 | HRGMv2_0016_32_17 | 15431 | 16393 | - | 9.B.146.1.6 |
Gene ID: HRGMv2_0016_32_15
Type: CAZyme
Location: 12837 - 13955 (-)
Type: CAZyme
Location: 12837 - 13955 (-)
Gene ID: HRGMv2_0016_32_16
Type: pfam
Location: 13952 - 15322 (-)
Type: pfam
Location: 13952 - 15322 (-)
Gene ID: HRGMv2_0016_32_17
Type: TC
Location: 15431 - 16393 (-)
Type: TC
Location: 15431 - 16393 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.