Cluster: HRGMv2_0016_CGC8
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0016
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0016_16 | HRGMv2_0016_16_1 | 2 | 886 | + | GH73 |
| pfam | HRGMv2_0016_16 | HRGMv2_0016_16_2 | 883 | 1353 | + | SpoU_methylase |
| pfam | HRGMv2_0016_16 | HRGMv2_0016_16_3 | 1350 | 1712 | + | PTPS |
| TC | HRGMv2_0016_16 | HRGMv2_0016_16_4 | 1706 | 2473 | + | 9.B.10.1.1 |
Gene ID: HRGMv2_0016_16_1
Type: CAZyme
Location: 2 - 886 (+)
Type: CAZyme
Location: 2 - 886 (+)
Gene ID: HRGMv2_0016_16_2
Type: pfam
Location: 883 - 1353 (+)
Type: pfam
Location: 883 - 1353 (+)
Gene ID: HRGMv2_0016_16_3
Type: pfam
Location: 1350 - 1712 (+)
Type: pfam
Location: 1350 - 1712 (+)
Gene ID: HRGMv2_0016_16_4
Type: TC
Location: 1706 - 2473 (+)
Type: TC
Location: 1706 - 2473 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.