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Cluster: HRGMv2_0016_CGC7

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
TC HRGMv2_0016_13 HRGMv2_0016_13_6 6175 6999 + 3.A.1.24.1
peptidase HRGMv2_0016_13 HRGMv2_0016_13_7 7017 8348 + M20.UPW
TF HRGMv2_0016_13 HRGMv2_0016_13_8 8342 9205 - HTH_1
TC HRGMv2_0016_13 HRGMv2_0016_13_9 9315 11078 + 3.A.1.135.5
TC HRGMv2_0016_13 HRGMv2_0016_13_10 11080 12819 + 3.A.1.135.5
NULL(UNKNOWN) HRGMv2_0016_13 HRGMv2_0016_13_11 12912 13241 + NULL(UNKNOWN)
[View Structural Homologs]
TC HRGMv2_0016_13 HRGMv2_0016_13_12 13792 15204 + 2.A.47.3.1
pfam HRGMv2_0016_13 HRGMv2_0016_13_13 15291 16751 + NAPRTase | NAPRTase_N | NAPRTase_C
pfam HRGMv2_0016_13 HRGMv2_0016_13_14 16927 17430 + Cupin_2
TC HRGMv2_0016_13 HRGMv2_0016_13_15 17596 18972 + 3.B.1.1.1
CAZyme HRGMv2_0016_13 HRGMv2_0016_13_16 19189 21252 - GT51
pfam HRGMv2_0016_13 HRGMv2_0016_13_17 21536 22054 + GreA_GreB | GreA_GreB_N
pfam HRGMv2_0016_13 HRGMv2_0016_13_18 22082 24067 + tRNA-synt_2 | tRNA_anti-codon | tRNA_bind
TC HRGMv2_0016_13 HRGMv2_0016_13_19 24214 25599 + 2.A.66.1.33
peptidase HRGMv2_0016_13 HRGMv2_0016_13_20 25790 26980 + M20.UPW
TC HRGMv2_0016_13 HRGMv2_0016_13_21 27023 28147 + 2.A.25.1.9
Gene ID: HRGMv2_0016_13_6
Type: TC
Location: 6175 - 6999 (+)
Gene ID: HRGMv2_0016_13_7
Type: peptidase
Location: 7017 - 8348 (+)
Gene ID: HRGMv2_0016_13_8
Type: TF
Location: 8342 - 9205 (-)
Gene ID: HRGMv2_0016_13_9
Type: TC
Location: 9315 - 11078 (+)
Gene ID: HRGMv2_0016_13_10
Type: TC
Location: 11080 - 12819 (+)
Gene ID: HRGMv2_0016_13_11
Type:
Location: 12912 - 13241 (+)
Gene ID: HRGMv2_0016_13_12
Type: TC
Location: 13792 - 15204 (+)
Gene ID: HRGMv2_0016_13_13
Type: pfam
Location: 15291 - 16751 (+)
Gene ID: HRGMv2_0016_13_14
Type: pfam
Location: 16927 - 17430 (+)
Gene ID: HRGMv2_0016_13_15
Type: TC
Location: 17596 - 18972 (+)
Gene ID: HRGMv2_0016_13_16
Type: CAZyme
Location: 19189 - 21252 (-)
Gene ID: HRGMv2_0016_13_17
Type: pfam
Location: 21536 - 22054 (+)
Gene ID: HRGMv2_0016_13_18
Type: pfam
Location: 22082 - 24067 (+)
Gene ID: HRGMv2_0016_13_19
Type: TC
Location: 24214 - 25599 (+)
Gene ID: HRGMv2_0016_13_20
Type: peptidase
Location: 25790 - 26980 (+)
Gene ID: HRGMv2_0016_13_21
Type: TC
Location: 27023 - 28147 (+)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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