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Cluster: HRGMv2_0016_CGC6

🧬 Cluster Details

Gene Type Contig ID Protein ID Start Stop Direction Protein Family
CAZyme HRGMv2_0016_8 HRGMv2_0016_8_17 20015 21010 - GT8
CAZyme HRGMv2_0016_8 HRGMv2_0016_8_18 21007 22080 - GT9
CAZyme HRGMv2_0016_8 HRGMv2_0016_8_19 22064 22855 - GT25
pfam HRGMv2_0016_8 HRGMv2_0016_8_20 22888 24087 - Wzy_C
CAZyme HRGMv2_0016_8 HRGMv2_0016_8_21 24111 25040 - GT8
CAZyme HRGMv2_0016_8 HRGMv2_0016_8_22 25060 25812 - GT2
pfam HRGMv2_0016_8 HRGMv2_0016_8_23 26018 26566 - Lysine_decarbox | LDcluster4
TC HRGMv2_0016_8 HRGMv2_0016_8_24 26739 28343 - 2.A.58.2.2
Gene ID: HRGMv2_0016_8_17
Type: CAZyme
Location: 20015 - 21010 (-)
Gene ID: HRGMv2_0016_8_18
Type: CAZyme
Location: 21007 - 22080 (-)
Gene ID: HRGMv2_0016_8_19
Type: CAZyme
Location: 22064 - 22855 (-)
Gene ID: HRGMv2_0016_8_20
Type: pfam
Location: 22888 - 24087 (-)
Gene ID: HRGMv2_0016_8_21
Type: CAZyme
Location: 24111 - 25040 (-)
Gene ID: HRGMv2_0016_8_22
Type: CAZyme
Location: 25060 - 25812 (-)
Gene ID: HRGMv2_0016_8_23
Type: pfam
Location: 26018 - 26566 (-)
Gene ID: HRGMv2_0016_8_24
Type: TC
Location: 26739 - 28343 (-)

Taxonomic Lineage

Gene Level Read Mapping

  • Diet (De Filippis et al., 2019)
  • Diet (Huang et al., 2024)
  • IBD (Lloyd-Price et al., 2019)

Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)

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No differentially abundant genes found in the 2019 study.

🧭 Explore Read Mapping of CGC

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