Cluster: HRGMv2_0016_CGC5
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 3
- Substrate:
- Genome ID: HRGMv2_0016
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0016_5 | HRGMv2_0016_5_52 | 55175 | 56512 | + | CE11 |
| pfam | HRGMv2_0016_5 | HRGMv2_0016_5_53 | 56528 | 57337 | + | Hexapep | Hexapep | Acetyltransf_11 |
| pfam | HRGMv2_0016_5 | HRGMv2_0016_5_54 | 57344 | 58168 | + | LpxI_C | LpxI_N |
| CAZyme | HRGMv2_0016_5 | HRGMv2_0016_5_55 | 58300 | 59436 | + | GT19 |
| TC | HRGMv2_0016_5 | HRGMv2_0016_5_56 | 59433 | 61199 | + | 3.A.1.106.3 |
| CAZyme | HRGMv2_0016_5 | HRGMv2_0016_5_57 | 61260 | 63791 | + | GT30 |
Gene ID: HRGMv2_0016_5_52
Type: CAZyme
Location: 55175 - 56512 (+)
Type: CAZyme
Location: 55175 - 56512 (+)
Gene ID: HRGMv2_0016_5_53
Type: pfam
Location: 56528 - 57337 (+)
Type: pfam
Location: 56528 - 57337 (+)
Gene ID: HRGMv2_0016_5_54
Type: pfam
Location: 57344 - 58168 (+)
Type: pfam
Location: 57344 - 58168 (+)
Gene ID: HRGMv2_0016_5_55
Type: CAZyme
Location: 58300 - 59436 (+)
Type: CAZyme
Location: 58300 - 59436 (+)
Gene ID: HRGMv2_0016_5_56
Type: TC
Location: 59433 - 61199 (+)
Type: TC
Location: 59433 - 61199 (+)
Gene ID: HRGMv2_0016_5_57
Type: CAZyme
Location: 61260 - 63791 (+)
Type: CAZyme
Location: 61260 - 63791 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.