Cluster: HRGMv2_0016_CGC3
🧬 Cluster Details
- Gene Count: 6
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0016
- CGC Family ID: CGCFAM_01667
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0016_2 | HRGMv2_0016_2_1 | 81 | 1496 | - | AA4 |
| NULL(UNKNOWN) | HRGMv2_0016_2 | HRGMv2_0016_2_2 | 1689 | 3347 | + |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0016_2 | HRGMv2_0016_2_3 | 3455 | 4615 | + | 2.A.6.2.19 |
| TC | HRGMv2_0016_2 | HRGMv2_0016_2_4 | 4629 | 7778 | + | 2.A.6.2.14 |
| TC | HRGMv2_0016_2 | HRGMv2_0016_2_5 | 8052 | 9791 | + | 3.A.1.203.11 |
| TC | HRGMv2_0016_2 | HRGMv2_0016_2_6 | 9825 | 11189 | + | 2.A.25.1.4 |
Gene ID: HRGMv2_0016_2_1
Type: CAZyme
Location: 81 - 1496 (-)
Type: CAZyme
Location: 81 - 1496 (-)
Gene ID: HRGMv2_0016_2_2
Type:
Location: 1689 - 3347 (+)
Type:
Location: 1689 - 3347 (+)
Gene ID: HRGMv2_0016_2_3
Type: TC
Location: 3455 - 4615 (+)
Type: TC
Location: 3455 - 4615 (+)
Gene ID: HRGMv2_0016_2_4
Type: TC
Location: 4629 - 7778 (+)
Type: TC
Location: 4629 - 7778 (+)
Gene ID: HRGMv2_0016_2_5
Type: TC
Location: 8052 - 9791 (+)
Type: TC
Location: 8052 - 9791 (+)
Gene ID: HRGMv2_0016_2_6
Type: TC
Location: 9825 - 11189 (+)
Type: TC
Location: 9825 - 11189 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.