Cluster: HRGMv2_0016_CGC2
🧬 Cluster Details
- Gene Count: 5
- CAZyme Count: 1
- Substrate:
- Genome ID: HRGMv2_0016
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0016_1 | HRGMv2_0016_1_31 | 36549 | 37988 | - | AA4 |
| TC | HRGMv2_0016_1 | HRGMv2_0016_1_32 | 38308 | 39747 | - | 2.A.114.1.4 |
| NULL(UNKNOWN) | HRGMv2_0016_1 | HRGMv2_0016_1_33 | 39949 | 41187 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| NULL(UNKNOWN) | HRGMv2_0016_1 | HRGMv2_0016_1_34 | 41304 | 41783 | - |
NULL(UNKNOWN)
[View Structural Homologs] |
| TC | HRGMv2_0016_1 | HRGMv2_0016_1_35 | 41787 | 43409 | - | 3.A.16.1.2 |
Gene ID: HRGMv2_0016_1_31
Type: CAZyme
Location: 36549 - 37988 (-)
Type: CAZyme
Location: 36549 - 37988 (-)
Gene ID: HRGMv2_0016_1_32
Type: TC
Location: 38308 - 39747 (-)
Type: TC
Location: 38308 - 39747 (-)
Gene ID: HRGMv2_0016_1_33
Type:
Location: 39949 - 41187 (-)
Type:
Location: 39949 - 41187 (-)
Gene ID: HRGMv2_0016_1_34
Type:
Location: 41304 - 41783 (-)
Type:
Location: 41304 - 41783 (-)
Gene ID: HRGMv2_0016_1_35
Type: TC
Location: 41787 - 43409 (-)
Type: TC
Location: 41787 - 43409 (-)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
Loading chart...
No differentially abundant genes found in the 2019 study.