Cluster: HRGMv2_0016_CGC1
🧬 Cluster Details
- Gene Count: 4
- CAZyme Count: 2
- Substrate:
- Genome ID: HRGMv2_0016
- Continent: Europe
- Source Study: Ma et al., 2024 →
| Gene Type | Contig ID | Protein ID | Start | Stop | Direction | Protein Family |
|---|---|---|---|---|---|---|
| CAZyme | HRGMv2_0016_1 | HRGMv2_0016_1_23 | 26890 | 27939 | - | GH170 |
| TC | HRGMv2_0016_1 | HRGMv2_0016_1_24 | 28049 | 29455 | - | 4.A.1.2.7 |
| STP | HRGMv2_0016_1 | HRGMv2_0016_1_25 | 29445 | 30281 | - | SIS |
| CAZyme | HRGMv2_0016_1 | HRGMv2_0016_1_26 | 30349 | 31476 | + | CE9 |
Gene ID: HRGMv2_0016_1_23
Type: CAZyme
Location: 26890 - 27939 (-)
Type: CAZyme
Location: 26890 - 27939 (-)
Gene ID: HRGMv2_0016_1_24
Type: TC
Location: 28049 - 29455 (-)
Type: TC
Location: 28049 - 29455 (-)
Gene ID: HRGMv2_0016_1_25
Type: STP
Location: 29445 - 30281 (-)
Type: STP
Location: 29445 - 30281 (-)
Gene ID: HRGMv2_0016_1_26
Type: CAZyme
Location: 30349 - 31476 (+)
Type: CAZyme
Location: 30349 - 31476 (+)
Taxonomic Lineage
Domain
Bacteria
Phylum
Bacillota_C
Class
Negativicutes
Order
Acidaminococcales
Family
Acidaminococcaceae
Genus
Acidaminococcus
Species
Acidaminococcus timonensis
Gene Level Read Mapping
Gene level read mapping in Diet Intervention Studies (De Filippis et al., 2019)
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No differentially abundant genes found in the 2019 study.